Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGAATGCAGCAGCAGCTGA
...(((((((.((((((....&.)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001251974
GeneSymbolRCAN2
Binding site2136,2157
Score1.0
Seed0
Au0.529
Energy-20.9
Binding len16
Me-9.339
Phylopstem0.7235537857142856
Phylopflank1.24158440625
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure