Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTCCGACCGCAGCG
.....((((((((((...(((&)))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001251981
GeneSymbolRCAN3
Binding site840,857
Score0.985
Seed0
Au0.353
Energy-21.9
Binding len17
Me-13.899
Phylopstem0.030607299999999997
Phylopflank0.06162471625000021
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure