Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTCCGACCGCAGCG
.....((((((((((...(((&)))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001251985
GeneSymbolRCAN3
Binding site386,403
Score0.831
Seed0
Au0.353
Energy-21.9
Binding len17
Me-13.899
Phylopstem0.6686972
Phylopflank2.3569865175
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure