Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTATTACTCTTTATCACTGTCCTTGCATGTTTTTCTGTGCCAGGG
.(((((((((..((((((....&.)))))).......))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001251987
GeneSymbolTRDN
Binding site1646,1695
Score0.872
Seed1
Au0.529
Energy-18.2
Binding len24
Me-9.965
Phylopstem-0.13488869999999997
Phylopflank-0.10324450499999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure