Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGCAGCACAAGCAGCAGCT
..((.(((((((((((((...&))))))).)..))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001251987
GeneSymbolTRDN
Binding site1271,1291
Score0.846
Seed0
Au0.603
Energy-17.2
Binding len20
Me-9.076
Phylopstem0.4467633125
Phylopflank0.012570260499999968
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end5
PositionCDS
2D Structure