Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGTGGATCATGCCCAGGGCGGCAGCGGCGGCGGTTGCGGG
((((((((((.(((((.....&.))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252006
GeneSymbolPAPOLA
Binding site137,182
Score0.846
Seed1
Au0.221
Energy-22.4
Binding len18
Me-6.762
Phylopstem2.702747
Phylopflank1.81612656375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure