Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACATTGTGTCGGAAGCTGCAGTGCAAG
(((((.((((((((((((((.&)))))))...........)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252020
GeneSymbolTRPM1
Binding site4773,4804
Score0.969
Seed0
Au0.559
Energy-23.2
Binding len31
Me-5.839
Phylopstem2.8430540800000004
Phylopflank4.529707387499999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure