Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACATTGTGTCGGAAGCTGCAGTGCAAG
(((((.((((((((((((((.&)))))))...........)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252024
GeneSymbolTRPM1
Binding site4673,4704
Score0.969
Seed0
Au0.559
Energy-23.2
Binding len31
Me-5.839
Phylopstem3.3770074400000003
Phylopflank4.1823652975000005
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure