Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAACTGGCTCAT
.((.(((..((((((((((((&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252036
GeneSymbolRAB5B
Binding site2409,2427
Score0.923
Seed0
Au0.544
Energy-19.8
Binding len18
Me-10.195
Phylopstem0.9762568666666666
Phylopflank0.6147214230000001
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure