Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCACCTCATCAGGAAGGGGGCTGCAGCCAACGACGGGAAACTCCAGCCAGGTGA
(((((((((((((((((((.((&))))))).........))))))))))...........................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001363519
GeneSymbolPDZD9
Binding site226,284
Score0.846
Seed1
Au0.426
Energy-20.6
Binding len58
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings32
Pairings in 3prime end7
PositionCDS
2D Structure