Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCTGCCCGCTGCC
..(((((.((((..((((((.&))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252039
GeneSymbolRAB5C
Binding site1057,1075
Score0.846
Seed0
Au0.294
Energy-19.9
Binding len18
Me-9.417
Phylopstem4.4043054999999995
Phylopflank5.78733543875
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure