Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGCCTCAAAGAGAGGAGCATTGTTGGCCAGGA
.((((((..(((((((......&.)))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001252043
GeneSymbolTAOK2
Binding site3038,3071
Score0.846
Seed1
Au0.397
Energy-22.4
Binding len17
Me-7.163
Phylopstem5.5145928571428575
Phylopflank2.9361967224999987
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end2
PositionCDS
2D Structure