Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCTATTTTCACCGCATCTGCAGT
((((((.((((((.((((((.&)))))).......)))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252078
GeneSymbolUSP15
Binding site11327,11354
Score1.0
Seed0
Au0.544
Energy-20.6
Binding len27
Me-6.338
Phylopstem0.3790941666666667
Phylopflank0.03843052499999999
Longest consecutive pairings6
Position of longest consecutive pairings21
Pairings in 3prime end6
Position3UTR
2D Structure