Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGGCAGTCAAGGCCGCAGTTAGCC
..((((((((((((((..(((&)))...)))......))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252078
GeneSymbolUSP15
Binding site5467,5495
Score0.846
Seed1
Au0.412
Energy-19.0
Binding len28
Me-4.957
Phylopstem-0.1333374333333333
Phylopflank0.008393785000000015
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end6
Position3UTR
2D Structure