Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTGACATCGCGACGCTGCT
..((((((((((.(((.(((.&))).))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252079
GeneSymbolUSP15
Binding site50,70
Score0.846
Seed1
Au0.382
Energy-17.2
Binding len20
Me-6.246
Phylopstem2.4804491666666664
Phylopflank4.131344940000001
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure