Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCAGTGTCAGCAGAGGGCCCAGCTGCAC
.((((((((.((((((((((.&))))))..............)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252120
GeneSymbolPASK
Binding site590,623
Score0.923
Seed1
Au0.353
Energy-23.8
Binding len33
Me-5.036
Phylopstem-0.17984200833333333
Phylopflank0.7555970687499999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure