Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCAGTGTCAGCAGAGGGCCCAGCTGCAC
.((((((((.((((((((((.&))))))..............)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252124
GeneSymbolPASK
Binding site162,195
Score0.846
Seed1
Au0.353
Energy-23.8
Binding len33
Me-5.036
Phylopstem-1.0315127916666667
Phylopflank-0.6822918850000002
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure