Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTGGGCTGGGGCTGCC
..((((((.(((((..(((((&)))))..))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252124
GeneSymbolPASK
Binding site1854,1874
Score0.846
Seed1
Au0.324
Energy-23.8
Binding len20
Me-6.982
Phylopstem4.629945
Phylopflank3.90849381625
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure