Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTACTGCAGCCTCAGTTGCC
..(((((((.(((((((((((&))))..))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252127
GeneSymbolAP4E1
Binding site2788,2810
Score1.0
Seed1
Au0.588
Energy-22.2
Binding len22
Me-6.2
Phylopstem0.14120587692307693
Phylopflank1.48457662575
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure