Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAGGGCCGCGGCCGCGGA
((((.(((((((((.(..(((&))).).))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252129
GeneSymbolLSM4
Binding site266,287
Score0.846
Seed0
Au0.309
Energy-23.0
Binding len21
Me-8.792
Phylopstem-0.2513359111111111
Phylopflank-0.29725745037499995
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure