Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGGAACCGCAGCG
.....(((((((((.(..(((&)))..).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252197
GeneSymbolIRX5
Binding site539,556
Score0.923
Seed0
Au0.456
Energy-22.1
Binding len17
Me-14.401
Phylopstem4.3725598888888895
Phylopflank5.08049655125
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure