Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGAGCAGCTGGAGCTGCGGC
((((((((.((((((((((((&)))))..))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252204
GeneSymbolC4A
Binding site2584,2608
Score0.846
Seed1
Au0.456
Energy-25.3
Binding len24
Me-4.994
Phylopstem2.0338730714285713
Phylopflank0.5019918624999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure