Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAACAACCGCCAGATTCGCGGCCTGGAGGAGGAGCTGCAGT
((((((((((((((((..(((&)))..))))))))......................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252204
GeneSymbolC4A
Binding site4085,4129
Score1.0
Seed1
Au0.441
Energy-24.7
Binding len44
Me-3.938
Phylopstem0.6148414552631579
Phylopflank0.7248465481249999
Longest consecutive pairings8
Position of longest consecutive pairings31
Pairings in 3prime end6
PositionCDS
2D Structure