Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATTGAATAAAGCCAAACTTCCTTTGGGGCTGCT
..((((((.((((((((((((&))))))).......))))...........).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252231
GeneSymbolSEC24A
Binding site1483,1521
Score0.923
Seed1
Au0.574
Energy-18.4
Binding len38
Me-6.013
Phylopstem5.611916434666668
Phylopflank5.071792469999998
Longest consecutive pairings7
Position of longest consecutive pairings31
Pairings in 3prime end8
PositionCDS
2D Structure