Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCAGGCCCAGCTGCT
..(((((((.((((...(((.&)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252294
GeneSymbolSPDEF
Binding site1596,1613
Score0.846
Seed1
Au0.294
Energy-21.2
Binding len17
Me-7.168
Phylopstem0.002917999999999992
Phylopflank0.3237661225
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure