Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGGCCTGCAAGCTGCT
..((((((((((((((.....&)))))).))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252294
GeneSymbolSPDEF
Binding site835,852
Score0.846
Seed1
Au0.426
Energy-20.6
Binding len17
Me-4.957
Phylopstem3.4105999999999996
Phylopflank4.4439660087499995
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end3
PositionCDS
2D Structure