Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATTCAGCTGGCGGCCGAGCTGCGGG
((((((((.(((((((..(((&.))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252334
GeneSymbolSH2D3C
Binding site1966,1994
Score1.0
Seed1
Au0.382
Energy-24.2
Binding len21
Me-4.994
Phylopstem2.4816237500000002
Phylopflank3.1821005799999993
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure