Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGACAAGGAGCAGCTGACAGC
((((((((((..((((..(((&))).))))...))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252393
GeneSymbolTNIP1
Binding site1325,1348
Score0.846
Seed1
Au0.441
Energy-20.2
Binding len23
Me-10.109
Phylopstem4.341169218181817
Phylopflank3.1113154025000003
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure