Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGTACCACTTCTCCATCCAGGGCCGCACCGTGTGCCAGGG
.((((((((((..(((......&.)))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001252404
GeneSymbolTMEM249
Binding site426,467
Score1.0
Seed1
Au0.338
Energy-21.2
Binding len17
Me-8.429
Phylopstem0.6149190000000001
Phylopflank0.720016115
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure