Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCCTGCTGGCTGCT
..((((((((((..(.(((((&)))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252512
GeneSymbolSOAT1
Binding site59,77
Score0.846
Seed1
Au0.353
Energy-18.5
Binding len18
Me-7.336
Phylopstem0.16507852727272723
Phylopflank0.3429065925000001
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end6
Position5UTR
2D Structure