Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAATTGCTGCCAGCATTCAAGTGCGCTGGGCCTGGCCCGCTGCAC
.((((((.(.((((...((((&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252597
GeneSymbolCLPS
Binding site257,303
Score0.923
Seed1
Au0.353
Energy-17.2
Binding len17
Me-8.318
Phylopstem5.0377149999999995
Phylopflank1.7273725225
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure