Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCCCGGGCTGCAGC
((((((((..(((((...(((&))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252607
GeneSymbolTHBS3
Binding site2469,2488
Score0.846
Seed1
Au0.338
Energy-21.4
Binding len19
Me-6.47
Phylopstem4.899169375
Phylopflank3.6453133199999996
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure