Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAGGACAACTGCCCACAGCTGCC
..((((((((((((((..(((&)))....))))))))....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252608
GeneSymbolTHBS3
Binding site1563,1589
Score0.846
Seed1
Au0.441
Energy-21.9
Binding len26
Me-4.957
Phylopstem4.499231611111111
Phylopflank3.706372611249999
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure