Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCCCGGGCTGCAGC
((((((((..(((((...(((&))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252608
GeneSymbolTHBS3
Binding site2136,2155
Score0.846
Seed1
Au0.338
Energy-21.4
Binding len19
Me-6.47
Phylopstem4.343543375
Phylopflank3.6054946435000006
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure