Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTATGAAGGCGCAGCTGA
...((((((((.((.......&.)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252657
GeneSymbolPP2D1
Binding site1957,1976
Score0.846
Seed0
Au0.588
Energy-17.4
Binding len13
Me-10.83
Phylopstem-0.8070887875
Phylopflank-0.323299535
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure