Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCAAGCAAGGTGGTAACAGTGATCACAGCCTGGGCTGCAGG
((((((((..((((((.....&.))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252660
GeneSymbolEPB41L2
Binding site12,57
Score0.974
Seed1
Au0.5
Energy-22.2
Binding len18
Me-6.236
Phylopstem4.18991625
Phylopflank3.6291849341113647
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure