Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTTAAATACGATTATGCGCTGCAGA
(((((((.(((((((((....&.))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363527
GeneSymbolIFNGR1
Binding site220,248
Score0.846
Seed1
Au0.544
Energy-17.4
Binding len20
Me-6.251
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure