Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGGCAGCAGGCAGCATGATGCAGA
((((((((((.((((((((((&)))))).))))..)))))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001252678
GeneSymbolBBS4
Binding site688,716
Score0.846
Seed1
Au0.426
Energy-20.5
Binding len28
Me-6.762
Phylopstem4.6844494545454545
Phylopflank5.348407925
Longest consecutive pairings6
Position of longest consecutive pairings22
Pairings in 3prime end8
PositionCDS
2D Structure