Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGCCAGCGCAGCTGCAT
.(((((((((.((((...((.&))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001253389
GeneSymbolISYNA1
Binding site1361,1379
Score0.923
Seed1
Au0.338
Energy-23.1
Binding len18
Me-6.851
Phylopstem4.124691
Phylopflank2.44055445
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure