Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAAGGAGGCAGCTT
....((((((..(((((((((&)))))))))....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001253676
GeneSymbolTBPL1
Binding site4404,4424
Score0.846
Seed0
Au0.618
Energy-22.0
Binding len20
Me-15.718
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure