Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGCTTAGCCCGTAGTCTGCAGA
((((((((((((...((((((&)).))))..)))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001253676
GeneSymbolTBPL1
Binding site846,869
Score0.923
Seed1
Au0.588
Energy-20.3
Binding len23
Me-6.819
Phylopstem4.305299076923076
Phylopflank6.007029225000001
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure