Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAAAGTTTCGTGGAGAATACAATAAGCATGCGCAGCTGTGGA
(((((((((((..(((.....&.)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001253727
GeneSymbolRXFP1
Binding site1569,1614
Score0.923
Seed1
Au0.544
Energy-20.9
Binding len18
Me-8.574
Phylopstem6.996025705454545
Phylopflank4.7421517374999995
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure