Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGAAAAGGAGGAGGCGTGGTGGGACTGCGGCTGCAT
.(((((((((((((.((....&.)).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001253772
GeneSymbolSYT6
Binding site2139,2178
Score1.0
Seed1
Au0.412
Energy-25.2
Binding len18
Me-4.529
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure