Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
((((((((((.(((((..(((&.)))..)))))..))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001253827
GeneSymbolGALNT14
Binding site2126,2167
Score0.846
Seed1
Au0.412
Energy-22.7
Binding len25
Me-6.762
Phylopstem-0.3952600909090909
Phylopflank0.02213435749999995
Longest consecutive pairings5
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure