Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCACTCCACCTCAGACCCAGTACTGCGGCTGCAGC
(((((((((((((.....(((&.)))....))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001253829
GeneSymbolPTPDC1
Binding site134,173
Score0.846
Seed1
Au0.265
Energy-24.5
Binding len22
Me-5.763
Phylopstem2.542117692307692
Phylopflank1.5500821462499998
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure