Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGGCGGCTGCATTTTAGTAATGGGTCA
.((((((((((((.((((...&)))).)))))))..........))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001253849
GeneSymbolVTCN1
Binding site1551,1579
Score0.846
Seed1
Au0.588
Energy-28.4
Binding len28
Me-4.65
Phylopstem0.8063987727272728
Phylopflank0.8295916837499999
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end4
Position3UTR
2D Structure