Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAAGACGCTGCTAATTGACTGCCACTTCGCAACTCAGGGGCGGCTGCAT
.(((((((((((((((.((((&.)))).)))))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001253849
GeneSymbolVTCN1
Binding site1513,1564
Score1.0
Seed1
Au0.559
Energy-24.3
Binding len27
Me-3.793
Phylopstem0.5384847850000001
Phylopflank0.57493742625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure