Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGGAGCCACGGTGACTGTAT
.((((((((.((((.((((((&)))))).)))).)))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001253849
GeneSymbolVTCN1
Binding site2620,2644
Score0.846
Seed1
Au0.559
Energy-20.7
Binding len24
Me-5.771
Phylopstem0.1427347090909091
Phylopflank-0.08030722124999998
Longest consecutive pairings6
Position of longest consecutive pairings18
Pairings in 3prime end7
Position3UTR
2D Structure