Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGGCGGCTGCATTTTAGTAATGGGTCA
.((((((((((((.((((...&)))).)))))))..........))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001253850
GeneSymbolVTCN1
Binding site1088,1116
Score0.923
Seed1
Au0.588
Energy-28.4
Binding len28
Me-4.65
Phylopstem0.1419581954545454
Phylopflank0.12008649874999996
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end4
Position3UTR
2D Structure