Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAAGACGCTGCTAATTGACTGCCACTTCGCAACTCAGGGGCGGCTGCAT
.(((((((((((((((.((((&.)))).)))))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001253850
GeneSymbolVTCN1
Binding site1050,1101
Score1.0
Seed1
Au0.559
Energy-24.3
Binding len27
Me-3.793
Phylopstem-0.051055455000000007
Phylopflank0.20937815125000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure